Commons Math example source code file (SumOfLogs.java)

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Java - Commons Math tags/keywords

abstractstorelessunivariatestatistic, abstractstorelessunivariatestatistic, io, override, override, serializable, serializable, sumoflogs, sumoflogs

The Commons Math SumOfLogs.java source code

/*
 * Licensed to the Apache Software Foundation (ASF) under one or more
 * contributor license agreements.  See the NOTICE file distributed with
 * this work for additional information regarding copyright ownership.
 * The ASF licenses this file to You under the Apache License, Version 2.0
 * (the "License"); you may not use this file except in compliance with
 * the License.  You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package org.apache.commons.math.stat.descriptive.summary;

import java.io.Serializable;

import org.apache.commons.math.stat.descriptive.AbstractStorelessUnivariateStatistic;

/**
 * Returns the sum of the natural logs for this collection of values.
 * <p>
 * Uses {@link java.lang.Math#log(double)} to compute the logs.  Therefore,
 * <ul>
 * <li>If any of values are < 0, the result is NaN.
 * <li>If all values are non-negative and less than
 * <code>Double.POSITIVE_INFINITY,  but at least one value is 0, the
 * result is <code>Double.NEGATIVE_INFINITY.
 * <li>If both Double.POSITIVE_INFINITY and
 * <code>Double.NEGATIVE_INFINITY are among the values, the result is
 * <code>NaN.
 * </ul>

 * <p>
 * <strong>Note that this implementation is not synchronized. If
 * multiple threads access an instance of this class concurrently, and at least
 * one of the threads invokes the <code>increment() or
 * <code>clear() method, it must be synchronized externally.

 *
 * @version $Revision: 811685 $ $Date: 2009-09-05 13:36:48 -0400 (Sat, 05 Sep 2009) $
 */
public class SumOfLogs extends AbstractStorelessUnivariateStatistic implements Serializable {

    /** Serializable version identifier */
    private static final long serialVersionUID = -370076995648386763L;

    /**Number of values that have been added */
    private int n;

    /**
     * The currently running value
     */
    private double value;

    /**
     * Create a SumOfLogs instance
     */
    public SumOfLogs() {
       value = 0d;
       n = 0;
    }

    /**
     * Copy constructor, creates a new {@code SumOfLogs} identical
     * to the {@code original}
     *
     * @param original the {@code SumOfLogs} instance to copy
     */
    public SumOfLogs(SumOfLogs original) {
        copy(original, this);
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void increment(final double d) {
        value += Math.log(d);
        n++;
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public double getResult() {
        if (n > 0) {
            return value;
        } else {
            return Double.NaN;
        }
    }

    /**
     * {@inheritDoc}
     */
    public long getN() {
        return n;
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void clear() {
        value = 0d;
        n = 0;
    }

    /**
     * Returns the sum of the natural logs of the entries in the specified portion of
     * the input array, or <code>Double.NaN if the designated subarray
     * is empty.
     * <p>
     * Throws <code>IllegalArgumentException if the array is null.

     * <p>
     * See {@link SumOfLogs}.</p>
     *
     * @param values the input array
     * @param begin index of the first array element to include
     * @param length the number of elements to include
     * @return the sum of the natural logs of the values or Double.NaN if
     * length = 0
     * @throws IllegalArgumentException if the array is null or the array index
     *  parameters are not valid
     */
    @Override
    public double evaluate(final double[] values, final int begin, final int length) {
        double sumLog = Double.NaN;
        if (test(values, begin, length)) {
            sumLog = 0.0;
            for (int i = begin; i < begin + length; i++) {
                sumLog += Math.log(values[i]);
            }
        }
        return sumLog;
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public SumOfLogs copy() {
        SumOfLogs result = new SumOfLogs();
        copy(this, result);
        return result;
    }

    /**
     * Copies source to dest.
     * <p>Neither source nor dest can be null.

     *
     * @param source SumOfLogs to copy
     * @param dest SumOfLogs to copy to
     * @throws NullPointerException if either source or dest is null
     */
    public static void copy(SumOfLogs source, SumOfLogs dest) {
        dest.n = source.n;
        dest.value = source.value;
    }
}